Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGACTGTGGGTGGAGCTGCCTGCTGCACTCAGCAGTGC
(((((((((((((((((((((.&)))))))))))........)))))................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148960
GeneSymbolCLDN19
Binding site1602,1648
Score0.846
Seed1
Au0.426
Energy-27.2
Binding len46
Me-3.938
Phylopstem-0.24687217999999997
Phylopflank-0.22158624999999996
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure