Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAGGAAGCACCGGGAAGATGCAGGCCTGCATGGTGCCGGGG
.((((((((...((((((....&.)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_148961
GeneSymbolOTOS
Binding site136,181
Score0.846
Seed1
Au0.309
Energy-21.1
Binding len17
Me-11.207
Phylopstem1.891501875
Phylopflank1.362645615
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure