Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAGGTGGTGCGGGGAGCGAGCTGA
((((.((((((((((((((...&)))))))).........)))))).)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148964
GeneSymbolCTSE
Binding site768,798
Score0.846
Seed0
Au0.441
Energy-25.0
Binding len30
Me-8.057
Phylopstem-0.012809021739130445
Phylopflank0.15024056249999998
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure