Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTCATTGGATTTATTTTATGCTAGGTT
((((((((((....((((((((&.))))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_148977
GeneSymbolPANK1
Binding site2525,2554
Score0.846
Seed1
Au0.765
Energy-17.3
Binding len22
Me-12.255
Phylopstem-0.31184755999999997
Phylopflank0.1277093575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure