Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGCTGGGTTGGTGA
(((((((.((...((((((...&))))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152132
GeneSymbolPSMA3
Binding site695,713
Score0.846
Seed1
Au0.632
Energy-16.8
Binding len18
Me-13.712
Phylopstem6.2368684285714275
Phylopflank5.74445568625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure