Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTGTGTGTCAGA
..((((((((((..((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152219
GeneSymbolGJD3
Binding site3965,3980
Score0.846
Seed1
Au0.603
Energy-17.8
Binding len15
Me-7.103
Phylopstem-0.2772818
Phylopflank0.19951682750000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure