Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCATGTCCCTACAAACCCATGATTGTCAGGGAGGTGCCAGTT
.((((((.(((((((((((((.&.)))).............))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152227
GeneSymbolSNX5
Binding site1669,1713
Score0.923
Seed1
Au0.485
Energy-25.0
Binding len35
Me-6.107
Phylopstem5.275208153846155
Phylopflank5.129435602374999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure