Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGAAACATGGAGCAGCGCACGCCCAGGCGATGCCAGTC
.((((((((...(((((((...&.))))))).)).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152233
GeneSymbolSNX6
Binding site1387,1429
Score0.846
Seed1
Au0.368
Energy-21.9
Binding len19
Me-11.207
Phylopstem1.4867862222222223
Phylopflank2.63519556625
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure