Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCATTCTTCATCTCCACTGAGAGCCAGAGCTGGTAGGAGCCGAGTGC
(((((((((((((((((.(...&.).)))))).....))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152244
GeneSymbolSNX11
Binding site1952,2002
Score0.846
Seed1
Au0.456
Energy-25.1
Binding len27
Me-3.938
Phylopstem0.029555569565217384
Phylopflank0.12691332250000004
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure