Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAAGATGGAGGAAGTA
.(((..(((((((((((((((.&)))))))))))..))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152260
GeneSymbolRPUSD2
Binding site1417,1440
Score1.0
Seed0
Au0.412
Energy-25.7
Binding len23
Me-9.813
Phylopstem0.3762078470588235
Phylopflank0.41507675
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure