Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTGAATTTGGTGATAGGAACTCTTTATTGTGCCAAAGGA
.((((((((((((((((((...&))))))))))..........................))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152275
GeneSymbolTTC30A
Binding site1668,1715
Score0.846
Seed1
Au0.647
Energy-18.9
Binding len47
Me-3.793
Phylopstem0.44545884565217386
Phylopflank0.45918892999999983
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end5
PositionCDS
2D Structure