Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAACTGGAGCAGTA
.(((.(((((.((((((((...&))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152275
GeneSymbolTTC30A
Binding site264,283
Score0.923
Seed0
Au0.338
Energy-23.6
Binding len19
Me-10.737
Phylopstem0.059685950000000015
Phylopflank0.09449635749999999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure