Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGAAATCTGGAAACAGAGGAACCGGTGA
((((((.((((((((.((((((&)))))))))............))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152275
GeneSymbolTTC30A
Binding site3549,3583
Score0.846
Seed0
Au0.559
Energy-23.5
Binding len34
Me-5.714
Phylopstem0.024772215000000042
Phylopflank-0.20032961918750003
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure