Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTGTGCCT
....((((((((..((((....&))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152280
GeneSymbolSYT11
Binding site4207,4222
Score0.923
Seed0
Au0.441
Energy-18.7
Binding len15
Me-11.693
Phylopstem0.799533
Phylopflank0.754821145
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure