Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAAGAACTGCCTGGTGA
(((((((...(((((((((...&)))))))))....))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152296
GeneSymbolATP1A3
Binding site1177,1199
Score0.846
Seed1
Au0.382
Energy-21.6
Binding len22
Me-8.55
Phylopstem5.234260333333334
Phylopflank5.145031317500001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure