Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTTCCCCTTGCTGCTATTGTATGGCTGGGG
.(((((((((((((((((....&.)))).)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152312
GeneSymbolLARGE2
Binding site2428,2462
Score0.872
Seed1
Au0.397
Energy-20.3
Binding len21
Me-3.793
Phylopstem0.4732501210526316
Phylopflank0.57287695875
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure