Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGAGAGGTCAGG
..((((((.((((((((((...&)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152318
GeneSymbolNOPCHAP1
Binding site5359,5377
Score1.0
Seed1
Au0.382
Energy-25.5
Binding len18
Me-6.013
Phylopstem0.15049130000000002
Phylopflank0.10661449999999997
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure