Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCTCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152318
GeneSymbolNOPCHAP1
Binding site1616,1639
Score0.923
Seed1
Au0.426
Energy-25.9
Binding len23
Me-10.109
Phylopstem0.20917536363636363
Phylopflank-0.070377075
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure