Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCATTCTGTTGCCCACACTGTGGTCTTAGTAGATAATTTGGGTG
((((((((((.(((((((((((&))))))))))).))).)))..........................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152329
GeneSymbolLRR1
Binding site1202,1252
Score0.846
Seed1
Au0.588
Energy-17.7
Binding len50
Me-6.762
Phylopstem5.438311581818182
Phylopflank4.023943217500001
Longest consecutive pairings11
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure