Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGGCTGCTGTGCCAGGC
.(((((((((....((((....&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152331
GeneSymbolACOT4
Binding site437,455
Score0.846
Seed1
Au0.25
Energy-18.5
Binding len15
Me-12.111
Phylopstem0.31299477777777773
Phylopflank2.3420529349999994
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure