Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATAGCTCAGCCAC
...(((((.((.(((((((...&))))))).))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047423711
GeneSymbolSUSD4
Binding site2572,2591
Score0.878
Seed0
Au0.412
Energy-20.5
Binding len19
Me-10.918
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure