Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTGCAAAAGTAGTAAGGAATATGCGTGATGCTGCCAGGTT
((((((((((..(((((.((((&.)))).)))))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152347
GeneSymbolEFCAB13
Binding site2405,2449
Score1.0
Seed1
Au0.574
Energy-18.7
Binding len25
Me-10.109
Phylopstem0.631775
Phylopflank0.53868031625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure