Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCCCTGAGGGGAGCCAA
...(((((((((((.(((((((&)))).))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152359
GeneSymbolCPT1C
Binding site1822,1843
Score1.0
Seed0
Au0.471
Energy-28.5
Binding len21
Me-7.25
Phylopstem2.4585672727272727
Phylopflank2.1554459124999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure