Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((((..&))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152384
GeneSymbolBBS5
Binding site1768,1790
Score0.846
Seed1
Au0.397
Energy-28.3
Binding len22
Me-10.109
Phylopstem0.2901196363636363
Phylopflank0.11473136725000004
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure