Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGCAGCTGCC
..((((((((((((((.....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047423787
GeneSymbolSPTAN1
Binding site5746,5762
Score0.846
Seed1
Au0.368
Energy-22.9
Binding len16
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure