Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCAGATGTTTCAGGCTCACACAGCCCTGGGGAGCCAGTT
.(((((((((((...((((...&.)))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152422
GeneSymbolPTPDC1
Binding site1728,1770
Score1.0
Seed1
Au0.471
Energy-26.1
Binding len18
Me-6.675
Phylopstem0.7891251909090911
Phylopflank1.19717754125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure