Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAATAGGATCCTTACCACCTGAAGTGGGGCAGCCAGG
..(((((((((((((((((...&))))))))........................))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152424
GeneSymbolAMER1
Binding site6192,6235
Score0.821
Seed1
Au0.471
Energy-24.0
Binding len43
Me-4.957
Phylopstem0.9164070880952379
Phylopflank0.40845772499999994
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end5
Position3UTR
2D Structure