Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCAGAGGCATATACTATCCAGAAGCAAGCACATGCCAA
...(((((..(((((((((((.&.)))))))))))..))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152433
GeneSymbolKBTBD3
Binding site1365,1407
Score0.846
Seed0
Au0.588
Energy-19.5
Binding len21
Me-8.813
Phylopstem0.3527694181818182
Phylopflank0.16793782699999996
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure