Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATGCCAGGA
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001290325
GeneSymbolUSP38
Binding site3114,3124
Score1.0
Seed1
Au0.618
Energy-15.7
Binding len10
Me-13.079
Phylopstem4.456096777777777
Phylopflank3.6175525112499987
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure