Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCTCCCAGAGTCATTTACTAGGGAGAGATAGTCCCAGTGC
((((((((((((((((((..((&))..)))))))..........)))))........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001290325
GeneSymbolUSP38
Binding site3186,3227
Score1.0
Seed1
Au0.574
Energy-23.3
Binding len41
Me-3.938
Phylopstem1.3515297055555557
Phylopflank2.3478494262500003
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure