Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGCTCATCCTGGAGGGCCAGG
..(((((.(((((((((((...&))))))........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001290325
GeneSymbolUSP38
Binding site669,694
Score0.846
Seed0
Au0.338
Energy-22.4
Binding len25
Me-7.271
Phylopstem2.462940168421053
Phylopflank3.07514169125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure