Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGTTGCAAATTGAGAAGAGGGTTGCTGGGTT
((((((((..(((((((((...&))))))))).................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001290342
GeneSymbolCERS3
Binding site94,129
Score0.846
Seed1
Au0.426
Energy-18.0
Binding len35
Me-6.236
Phylopstem0.23362146444444443
Phylopflank0.14354476975
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end5
Position5UTR
2D Structure