Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCCACCTTAGTGA
(((((((((((((((((((((.&))))))))))))...................))))).............................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001290357
GeneSymbolDHFR
Binding site3004,3074
Score0.846
Seed1
Au0.559
Energy-22.5
Binding len70
Me-3.938
Phylopstem2.9007918115942037
Phylopflank3.254969865
Longest consecutive pairings12
Position of longest consecutive pairings58
Pairings in 3prime end7
Position3UTR
2D Structure