Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTATCCAGGAAGGAGCA
.....(((((((((((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291088
GeneSymbolWDR87
Binding site4210,4228
Score1.0
Seed0
Au0.559
Energy-27.4
Binding len18
Me-13.666
Phylopstem-1.3269578117647058
Phylopflank-0.5267990025
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure