Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCAGTGTGTGTGTGTGGTCCATGCCCACTGCTGGTGCCAGGG
.((((((((.....((((....&.))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001291101
GeneSymbolCACNA2D2
Binding site4797,4841
Score0.846
Seed1
Au0.353
Energy-18.7
Binding len16
Me-13.353
Phylopstem3.8264840125000004
Phylopflank4.279935005000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure