Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGTCATTTCCCCCAAAGGCATCCCAGCCTGGGGGCCAGTGG
(((((((((((..(((((....&.)))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291101
GeneSymbolCACNA2D2
Binding site4642,4686
Score0.846
Seed1
Au0.412
Energy-29.9
Binding len21
Me-8.574
Phylopstem4.691575009090908
Phylopflank5.457581415
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure