Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGAAGTGTGTGCCAGC
..((((((((((...(((....&)))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001291309
GeneSymbolPCSK6
Binding site2436,2454
Score0.923
Seed1
Au0.471
Energy-18.2
Binding len18
Me-7.838
Phylopstem3.0664718
Phylopflank4.0301824250000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure