Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCGTTCACTGACCCAGGTCAAGGAGCTGGG
..(((((((((((((((((...&.)))))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291311
GeneSymbolPLD3
Binding site991,1024
Score0.846
Seed1
Au0.397
Energy-26.9
Binding len21
Me-4.957
Phylopstem4.642753210526315
Phylopflank4.32701566625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure