Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGGGTTGCTAGGG
.(((((((..(..(((......&)))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001291324
GeneSymbolBAHCC1
Binding site5505,5521
Score0.923
Seed1
Au0.382
Energy-17.5
Binding len16
Me-10.728
Phylopstem1.1441605714285714
Phylopflank2.2005985875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure