Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTGGGGACAGAGGCACCACCCAGGGAAGCAGGGCTGCTGCTGCACACCGGGGCCAGTGT
(((((((((((((((((((...&.)))))))))......................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291324
GeneSymbolBAHCC1
Binding site5367,5430
Score0.846
Seed1
Au0.279
Energy-28.9
Binding len43
Me-3.938
Phylopstem0.24149118536585365
Phylopflank0.7383316849999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure