Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGC
((((((((((((((((..(((&.)))..)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047423902
GeneSymbolPRPF38B
Binding site302,350
Score0.923
Seed1
Au0.265
Energy-29.8
Binding len23
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure