Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTCTTCATGCCAGGG
.((((((((...((((......&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001291424
GeneSymbolSH2B3
Binding site3394,3411
Score0.846
Seed1
Au0.544
Energy-16.0
Binding len17
Me-11.207
Phylopstem-0.35841
Phylopflank0.05665814624999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure