Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCAGCTGCAGCA
.....((((((((((..((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347465
GeneSymbolC1QA
Binding site719,734
Score0.923
Seed0
Au0.397
Energy-18.5
Binding len15
Me-13.899
Phylopstem1.19524609
Phylopflank1.6519617474999997
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure