Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGGCCTCACCATACTCCCTTTCAGGGCCAGG
..((((((((((((((((....&)))))))))....................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291726
GeneSymbolPGAP3
Binding site1429,1466
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len37
Me-4.957
Phylopstem-0.032015627777777785
Phylopflank-0.32683005249999997
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end4
Position3UTR
2D Structure