Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTTGTGCACTGGATCCCTCCTCCTTTCTCTGCCAGGC
.((((((((((((.(((((...&)))))))))).......................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001291746
GeneSymbolREL
Binding site5612,5653
Score0.821
Seed1
Au0.529
Energy-19.1
Binding len41
Me-4.65
Phylopstem-0.495238882857143
Phylopflank-0.16594878000000007
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end5
Position3UTR
2D Structure