Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCATCGAGGGCGCCGGTGG
(((((((.(((((...(((((.&)))))...))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291815
GeneSymbolHMCN2
Binding site4989,5011
Score0.846
Seed1
Au0.412
Energy-27.1
Binding len22
Me-8.077
Phylopstem-1.5311100857142859
Phylopflank1.1978834087499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure