Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGGGAGCTGGC
..(((((((((..((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347466
GeneSymbolC1QA
Binding site283,299
Score0.846
Seed1
Au0.279
Energy-24.1
Binding len16
Me-9.593
Phylopstem1.5709678888888887
Phylopflank2.2095888437499998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure