Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGGCCCTGCCGGAATGTGCAGCCTGTGG
(((.(((((((((((((((...&)))))))))))................)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291920
GeneSymbolRXRA
Binding site5233,5269
Score0.923
Seed0
Au0.309
Energy-26.0
Binding len36
Me-6.97
Phylopstem-0.358291930967742
Phylopflank0.10216693299999999
Longest consecutive pairings11
Position of longest consecutive pairings25
Pairings in 3prime end5
Position3UTR
2D Structure