Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((.(((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291956
GeneSymbolCDH18
Binding site330,353
Score0.846
Seed1
Au0.426
Energy-27.1
Binding len23
Me-10.109
Phylopstem0.6739814545454546
Phylopflank0.19887398624999997
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure