Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTGCTGAGGAGCTCAAGTA
.(((((((((((....((((((&))))))...))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291957
GeneSymbolCDH18
Binding site2443,2466
Score0.872
Seed1
Au0.471
Energy-20.5
Binding len23
Me-6.908
Phylopstem4.776841307692307
Phylopflank3.880033747125
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure